Skip to content

NERSC Documentation About

Initializing search

GitLab/NERSC/docs

NERSC Documentation

GitLab/NERSC/docs

Home
Getting Started
Accounts
Accounts
Iris
Iris
Systems
Systems
- Cori
  Cori
  - Cori System
  - Interconnect
  - KNL Modes
  - Timeline
    Timeline
    
    Main Timeline
    
    Default PE History
  - Application Porting and Performance
    Application Porting and Performance
    
    Getting started on KNL
- Data Transfer Nodes
Storage Systems
Storage Systems
- Overview
- Schematic
- Quotas and Purging
- Cori scratch
- Community
- Archive (HPSS)
  Archive (HPSS)
  - Introduction
  - Storage Statistics
- Global Home
- Global Common
- Cori Burst Buffer
- Project
- Edison scratch
- Backups
- Unix File Permissions
Connecting
Connecting
Environment
Policies
Policies
- Job Charging Policy
- Cray PE CDT Update Policy
- Software Support Policy
  Software Support Policy
Development
Development
- Compilers
  Compilers
  - Native Compilers
  - Compiler Wrappers (recommended)
- Build Tools
  Build Tools
- Programming Models
  Programming Models
  - Overview
  - MPI
    MPI
    
    About
    
    OpenMPI
  - OpenMP
    OpenMP
    
    About
    
    OpenMP Resources
    
    Tools for OpenMP
    
    False Sharing Detection using VTune Amplifier
  - UPC
  - UPC++
  - Kokkos
  - Raja
  - Coarrays
- Languages
  Languages
  - Julia
  - R
  - IDL
  - Python
    Python
    
    Python
    
    Best Practices
    
    Python on Cori KNL
    
    Scaling Up
    
    Multiprocessing
    
    mpi4py
    
    Profiling Python
    
    Python FAQ
- Libraries
  Libraries
  - About
  - FFTW
  - LAPACK
  - MKL
  - LibSci
  - HDF5
  - NetCDF
  - PETSc
- Developer Tools
  Developer Tools
- Containers
  Containers
Running Jobs
Running Jobs
- Overview
- Queue Policy
- Examples
- Affinity
- Interactive
- Best Practices
- Reservations
- Monitoring
- FAQs
- Workflow Tools
  Workflow Tools
- Checkpoint/Restart
  Checkpoint/Restart
  - Overview
  - DMTCP
Applications
Applications
- Overview
- AMBER
- Abinit
- BerkeleyGW
- CP2K
- CPMD
- GAMESS
- Gromacs
- LAMMPS
- Mathematica
- MATLAB
  MATLAB
  - MATLAB Overview
  - MATLAB Compiler
- MOLPRO
- NAMD
- NCAR Graphics
- NWChem
- SIESTA
- PARATEC
- ParaView
- Q-Chem
- Quantum ESPRESSO
- VASP
- VisIt
- WIEN2k
- Wannier90
Analytics
Analytics
- Overview
- Dask
- RStudio
- Spark
Data
Data
- Management
- Sharing
- Transfer
- Visualization
- Formats
- Policy
Machine Learning
Machine Learning
- Overview
- TensorFlow
- PyTorch
- TensorBoard
- Benchmarks
- Distributed training
- Hyperparameter optimization
- Science use-cases
  Science use-cases
  - Overview
  - HEP CNN
Performance
Performance
- Perlmutter Readiness
- Getting started on KNL
- Vectorization
- Parallelism
- Memory Bandwidth
- Arithmetic Intensity
- I/O
  I/O
  - Overview
  - I/O libraries
  - Lustre
  - Burst Buffer
  - KNL
- Portability
- Variability
- Case Studies
  Case Studies
  - Overview
  - AMReX
  - BerkeleyGW
  - Chombo-Crunch
  - EMGeo
  - HMMER3
  - MFDn
  - QPhiX
  - Quantum ESPRESSO
  - WARP
  - XGC1
- KNL Cache Mode
Services
Services
- Overview
- Spin
  Spin
  - Spin Overview
  - Getting Started Guide
    Getting Started Guide
    
    Overview
    
    Lesson 1
    
    Lesson 2
    
    Lesson 3
  - Cheat Sheet
  - Reference Guide
- Science Gateways
- NEWT
- Jupyter
- Globus
- CDash
  CDash
- CVMFS
- Databases
- GridFTP
- Scp
- Bbcp
Science Partners
Science Partners
- Joint Genome Institute (JGI)
  Joint Genome Institute (JGI)
  - JGI Resources
  - Systems
    Systems
    
    Overview
    
    Cori Genepool
    
    Cori ExVivo
  - Filesystems
  - Software
  - Training and Tutorials
  - Databases and Web Services
- Best Practices for Experimental Science
Acronyms
Current Known Issues
Help

Math Libraries¶

NERSC supports a wide range of math libraries. Many are available as modules.

FFTW
GNU Science Library (GSL)
LAPACK/ BLAS/ ScaLAPACK
- MKL
- LibSci
PETSc
Trillinos

Acknowledge NERSC
Privacy and Security Notice
Contact Us